Escherichia coli strain Broiler parent84

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent84 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. It exhibits mobility due to the presence of flagella and is typically found in pairs or as single cells. This strain is host-associated and has a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other vertebrates and invertebrates. Broiler parent84 has a biotic relationship that allows it to exist as a free-living organism while still being capable of colonizing multiple hosts. Its pathogenicity in humans is notable, as it is linked to a variety of health issues, including urinary tract infections (UTIs), gastrointestinal infections, peritonitis, and serious conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health effects underscore the strain's potential as a significant public health concern, particularly in foodborne infections and related diseases. The presence of a single replicon and two membranes is characteristic of E. coli, contributing to its adaptability and survival in various environments. The strain's ability to cause a wide range of infections highlights the ecological interplay between microorganisms and their hosts, revealing how E. coli can exploit different biological niches. Understanding the traits of Broiler parent84 can provide insights into its pathogenic mechanisms and potential impacts on both human health and animal health, emphasizing the importance of monitoring such strains in agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent84

Gene Summary

Adenine Count

1229477 bp

Thymine Count

1234102 bp

Guanine Count

1272375 bp

Cytosine Count

1252829 bp

Genome Length

4988882 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

341 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporter substrate-binding proteinEYY04_03140Not AvailablePositive615571 - 61718459903.3
low conductance mechanosensitive channel ynaiEYY04_03145Not AvailableNegative617235 - 61826638756.8
duf2534 family proteinEYY04_03150Not AvailablePositive618510 - 6187679339.82
universal stress protein uspeEYY04_03155Not AvailableNegative618817 - 61976735708.9
fumarate/nitrate reduction transcriptional regulator fnrEYY04_03160Not AvailableNegative619919 - 62067127968.9
methylated-dna--[protein]-cysteine s-methyltransferaseEYY04_03165Not AvailableNegative620866 - 62138119097.1
p-aminobenzoyl-glutamate transporterEYY04_03170Not AvailableNegative621392 - 62291854890.2
amidohydrolaseEYY04_03175Not AvailableNegative622955 - 62440052216.4
amidohydrolaseEYY04_03180Not AvailableNegative624400 - 62571046547.8
lysr family transcriptional regulatorEYY04_03185Not AvailablePositive625886 - 62679434089.2

Displaying genes 901 – 910 of 4813 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total