Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycjx family protein | EYY04_03090 | Not Available | Positive | 604898 - 606295 | 52625.6 |
| tigr01620 family protein | EYY04_03095 | Not Available | Positive | 606292 - 607353 | 39363.5 |
| transcriptional regulator tyrr | EYY04_03100 | Not Available | Positive | 607501 - 609042 | 57673.6 |
| thiol peroxidase | EYY04_03105 | Not Available | Negative | 609086 - 609592 | 17820.3 |
| l-ala-d/l-glu epimerase | EYY04_03110 | Not Available | Positive | 609711 - 610676 | 34637.9 |
| murein tripeptide amidase mpaa | EYY04_03115 | Not Available | Negative | 610651 - 611379 | 26559.4 |
| sdr family oxidoreductase | EYY04_03120 | Not Available | Negative | 611689 - 612327 | 23363.3 |
| alpha/beta hydrolase | EYY04_03125 | Not Available | Negative | 612345 - 613277 | 34087.5 |
| alpha/beta hydrolase | EYY04_03130 | Not Available | Negative | 613277 - 614197 | 33694.4 |
| lysr family transcriptional regulator | EYY04_03135 | Not Available | Positive | 614335 - 615234 | 33479.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




