Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate transporter nark | EYY04_02580 | Not Available | Positive | 503508 - 504899 | 49696.3 |
| nitrate reductase subunit alpha | EYY04_02585 | Not Available | Positive | 505415 - 509158 | 140466.0 |
| nitrate reductase subunit beta | EYY04_02590 | Not Available | Positive | 509155 - 510693 | 58083.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | EYY04_02595 | Not Available | Positive | 510690 - 511400 | 26444.3 |
| respiratory nitrate reductase subunit gamma | EYY04_02600 | Not Available | Positive | 511400 - 512077 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 512439 - 512523 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 512558 - 512642 | Not Available |
| formyltetrahydrofolate deformylase | EYY04_02620 | Not Available | Negative | 512802 - 513644 | 31922.6 |
| ychj family protein | EYY04_02625 | Not Available | Negative | 513694 - 514152 | 16991.2 |
| patatin-like phospholipase rssa | EYY04_02630 | Not Available | Positive | 514265 - 515170 | 33069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




