Escherichia coli strain Broiler parent84

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent84 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. It exhibits mobility due to the presence of flagella and is typically found in pairs or as single cells. This strain is host-associated and has a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other vertebrates and invertebrates. Broiler parent84 has a biotic relationship that allows it to exist as a free-living organism while still being capable of colonizing multiple hosts. Its pathogenicity in humans is notable, as it is linked to a variety of health issues, including urinary tract infections (UTIs), gastrointestinal infections, peritonitis, and serious conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health effects underscore the strain's potential as a significant public health concern, particularly in foodborne infections and related diseases. The presence of a single replicon and two membranes is characteristic of E. coli, contributing to its adaptability and survival in various environments. The strain's ability to cause a wide range of infections highlights the ecological interplay between microorganisms and their hosts, revealing how E. coli can exploit different biological niches. Understanding the traits of Broiler parent84 can provide insights into its pathogenic mechanisms and potential impacts on both human health and animal health, emphasizing the importance of monitoring such strains in agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent84

Gene Summary

Adenine Count

1229477 bp

Thymine Count

1234102 bp

Guanine Count

1272375 bp

Cytosine Count

1252829 bp

Genome Length

4988882 bp

Protein-coding Genes

4472 genes

Non-Coding Genes

341 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEYY04_10650Not AvailableNegative2145178 - 214546511099.4
hypothetical proteinEYY04_10655Not AvailablePositive2145529 - 21457658898.89
hypotheticalEYY04_10660Not AvailablePositive2145766 - 214606310828.9
TransposaseEYY04_10665Not AvailableNegative2146092 - 214766358725.2
TransposaseEYY04_10670Not AvailableNegative2147683 - 214803013055.0
Truncated transposaseEYY04_10675Not AvailableNegative2148030 - 214868024328.5
Host killer proteinEYY04_10680Not AvailableNegative2149076 - 21492375976.53
plasmid sos inhibition protein aEYY04_10685Not AvailableNegative2149513 - 215023227716.0
conjugation system sos inhibitor psibEYY04_10690Not AvailableNegative2150229 - 215066315859.8
Dna binding proteinEYY04_10695Not AvailableNegative2150718 - 215267671471.9

Displaying genes 51 – 60 of 4813 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total