Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rcsb | EYY04_22925 | Not Available | Positive | 4614971 - 4615621 | 23672.0 |
| two-component system sensor histidine kinase rcsc | EYY04_22930 | Not Available | Negative | 4615821 - 4618670 | 106513.0 |
| duf2135 domain-containing protein | EYY04_22935 | Not Available | Negative | 4618945 - 4619721 | 28277.2 |
| duf2300 domain-containing protein | EYY04_22940 | Not Available | Negative | 4619726 - 4621375 | 61453.1 |
| alpha-2-macroglobulin family protein | EYY04_22945 | Not Available | Negative | 4621376 - 4625770 | 162342.0 |
| duf1175 domain-containing protein | EYY04_22950 | Not Available | Negative | 4625914 - 4626537 | 23730.5 |
| duf2138 domain-containing protein | EYY04_22955 | Not Available | Negative | 4626534 - 4628222 | 62546.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | EYY04_22960 | Not Available | Negative | 4628371 - 4630998 | 96987.3 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | EYY04_22965 | Not Available | Positive | 4631145 - 4631867 | 26557.0 |
| hypothetical protein | EYY04_22970 | Not Available | Negative | 4631784 - 4632008 | 8480.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




