Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | EYY04_22825 | Not Available | Negative | 4594262 - 4594741 | 17699.4 |
| heme exporter protein ccmd | EYY04_22830 | Not Available | Negative | 4594738 - 4594947 | 7745.59 |
| heme exporter protein ccmc | EYY04_22835 | Not Available | Negative | 4594944 - 4595681 | 27886.9 |
| heme exporter protein ccmb | EYY04_22840 | Not Available | Negative | 4595723 - 4596385 | 23586.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | EYY04_22845 | Not Available | Negative | 4596382 - 4596999 | 22866.4 |
| cytochrome c-type protein napc | EYY04_22850 | Not Available | Negative | 4597018 - 4597620 | 23101.8 |
| nitrate reductase cytochrome c-type subunit | EYY04_22855 | Not Available | Negative | 4597630 - 4598079 | 16311.5 |
| quinol dehydrogenase ferredoxin subunit naph | EYY04_22860 | Not Available | Negative | 4598076 - 4598939 | 31889.4 |
| ferredoxin-type protein napg | EYY04_22865 | Not Available | Negative | 4598926 - 4599621 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | EYY04_22870 | Not Available | Negative | 4599628 - 4602114 | 93031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




