Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein subunit fima | EYY04_20230 | Not Available | Positive | 4107697 - 4108239 | 18475.5 |
| type 1 fimbriae chaperone fimc | EYY04_20235 | Not Available | Positive | 4108459 - 4109151 | 25432.1 |
| fimbrial biogenesis outer membrane usher protein | EYY04_20240 | Not Available | Positive | 4109182 - 4111791 | 96237.8 |
| type 1 fimbrin d-mannose specific adhesin fimh | EYY04_20245 | Not Available | Positive | 4111804 - 4112811 | 36628.1 |
| fimbriae assembly protein | EYY04_20250 | Not Available | Positive | 4112822 - 4113337 | 18193.6 |
| fimbriae biosynthesis transcriptional regulator fimz | EYY04_20255 | Not Available | Negative | 4113340 - 4113972 | 23678.9 |
| Trna-arg | Not Available | Not Available | Positive | 4114215 - 4114291 | Not Available |
| omptin family outer membrane protease ompt | EYY04_20605 | Not Available | Negative | 4161918 - 4162871 | 35537.1 |
| arac family transcriptional regulator | EYY04_20610 | Not Available | Negative | 4163385 - 4164146 | 29002.5 |
| duf4434 family protein | EYY04_20615 | Not Available | Negative | 4164329 - 4165219 | 33019.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




