Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec family protein | EYY04_18320 | Not Available | Negative | 3724432 - 3726696 | 84679.1 |
| integration host factor subunit beta | EYY04_18325 | Not Available | Negative | 3726903 - 3727187 | 10651.8 |
| 30s ribosomal protein s1 | EYY04_18330 | Not Available | Negative | 3727347 - 3729020 | 61161.5 |
| (d)cmp kinase | EYY04_18335 | Not Available | Negative | 3729131 - 3729814 | 24747.8 |
| metalloprotease | EYY04_18340 | Not Available | Negative | 3729987 - 3730751 | 26768.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EYY04_18345 | Not Available | Negative | 3730920 - 3732203 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EYY04_18350 | Not Available | Negative | 3732274 - 3733362 | 39842.6 |
| duf421 domain-containing protein | EYY04_18355 | Not Available | Negative | 3733561 - 3734253 | 26283.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EYY04_18360 | Not Available | Positive | 3734383 - 3736143 | 65669.0 |
| formate transporter foca | EYY04_18365 | Not Available | Positive | 3736549 - 3737406 | 30992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




