Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf416 family protein | EYY04_16735 | Not Available | Positive | 3403626 - 3404216 | 22613.9 |
| dna-binding protein hu-alpha | EYY04_16740 | Not Available | Positive | 3404403 - 3404675 | 9535.51 |
| duf1481 domain-containing protein | EYY04_16745 | Not Available | Positive | 3404688 - 3405383 | 26352.9 |
| zinc resistance sensor/chaperone zrap | EYY04_16750 | Not Available | Negative | 3405385 - 3405816 | 15388.6 |
| two-component system sensor histidine kinase zras | EYY04_16755 | Not Available | Positive | 3406054 - 3407430 | 50520.1 |
| sigma-54-dependent response regulator transcription factor zrar | EYY04_16760 | Not Available | Positive | 3407427 - 3408752 | 48313.3 |
| phosphoribosylamine--glycine ligase | EYY04_16765 | Not Available | Negative | 3408749 - 3410038 | 45957.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EYY04_16770 | Not Available | Negative | 3410050 - 3411639 | 57361.4 |
| is1 family transposase | EYY04_16775 | Not Available | Positive | 3412137 - 3412316 | 7115.77 |
| dna helicase uvrd | EYY04_16780 | Not Available | Negative | 3412570 - 3413592 | 39615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




