Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | EYY04_14820 | Not Available | Negative | 3012015 - 3013865 | 71177.9 |
| type vi secretion system baseplate subunit tsse | EYY04_14825 | Not Available | Negative | 3013869 - 3014282 | 15494.0 |
| type vi secretion system contractile sheath large subunit | EYY04_14830 | Not Available | Negative | 3014289 - 3015764 | 55733.1 |
| hypothetical protein | EYY04_14835 | Not Available | Negative | 3015815 - 3016039 | 8411.01 |
| type vi secretion system contractile sheath small subunit | EYY04_14840 | Not Available | Negative | 3016074 - 3016574 | 18062.5 |
| hcp family type vi secretion system effector | EYY04_14845 | Not Available | Positive | 3017270 - 3017788 | 19256.8 |
| type vi secretion system tip protein vgrg | EYY04_14850 | Not Available | Positive | 3017998 - 3020106 | 78916.0 |
| rhs repeat protein | EYY04_14855 | Not Available | Positive | 3020174 - 3023194 | 111866.0 |
| hypothetical protein | EYY04_14860 | Not Available | Positive | 3023195 - 3023390 | 7171.77 |
| glutathione-dependent disulfide-bond oxidoreductase | EYY04_14865 | Not Available | Negative | 3023381 - 3024247 | 32439.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




