Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | EYY04_14250 | Not Available | Positive | 2889190 - 2890563 | 50390.1 |
| d-galactonate dehydratase family protein | EYY04_14255 | Not Available | Positive | 2891062 - 2892276 | 45812.8 |
| mfs transporter | EYY04_14260 | Not Available | Positive | 2892343 - 2893626 | 46345.1 |
| dna-binding transcriptional regulator oxyr | EYY04_14265 | Not Available | Positive | 2893878 - 2894795 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | EYY04_14270 | Not Available | Negative | 2894778 - 2896178 | 51563.4 |
| hth-type transcriptional repressor fabr | EYY04_14275 | Not Available | Positive | 2896509 - 2897159 | 24536.5 |
| yijd family membrane protein | EYY04_14280 | Not Available | Positive | 2897159 - 2897518 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | EYY04_14285 | Not Available | Negative | 2897558 - 2898658 | 41985.3 |
| tonb-dependent vitamin b12 receptor btub | EYY04_14290 | Not Available | Positive | 2899027 - 2900871 | 68393.7 |
| glutamate racemase | EYY04_14295 | Not Available | Positive | 2900816 - 2901673 | 31133.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




