Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit a | EYY04_13625 | Not Available | Negative | 2756788 - 2757717 | 35461.2 |
| phenylacetic acid degradation bifunctional protein paaz | EYY04_13630 | Not Available | Positive | 2758002 - 2760047 | 73049.8 |
| primary-amine oxidase | EYY04_13635 | Not Available | Positive | 2760295 - 2762568 | 84414.2 |
| nad-dependent phenylacetaldehyde dehydrogenase | EYY04_13640 | Not Available | Negative | 2762626 - 2764125 | 53702.1 |
| transcriptional regulator fear | EYY04_13645 | Not Available | Positive | 2764361 - 2765266 | 34640.3 |
| prepilin peptidase | EYY04_13650 | Not Available | Positive | 2765847 - 2766656 | 29524.0 |
| hypothetical protein | EYY04_13655 | Not Available | Positive | 2766722 - 2767132 | 14670.8 |
| type ii secretion system protein gspc | EYY04_13660 | Not Available | Positive | 2767150 - 2768109 | 35759.2 |
| type ii secretion system protein gspd | EYY04_13665 | Not Available | Positive | 2768139 - 2770199 | 74206.1 |
| type ii secretion system protein gspe | EYY04_13670 | Not Available | Positive | 2770199 - 2771692 | 55207.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




