Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | EYY04_12960 | Not Available | Positive | 2623753 - 2625552 | 66340.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | EYY04_12965 | Not Available | Positive | 2625552 - 2627264 | 63963.8 |
| phosphoadenosine phosphosulfate reductase | EYY04_12970 | Not Available | Positive | 2627338 - 2628072 | 27974.3 |
| type i toxin-antitoxin system hok family toxin | EYY04_12980 | Not Available | Positive | 2628337 - 2628489 | 5559.11 |
| crispr-associated helicase/endonuclease cas3 | EYY04_12985 | Not Available | Positive | 2628683 - 2631382 | 101932.0 |
| type i-e crispr-associated protein cse1/casa | EYY04_12990 | Not Available | Positive | 2631480 - 2633042 | 58996.4 |
| type i-e crispr-associated protein cse2/casb | EYY04_12995 | Not Available | Positive | 2633039 - 2633578 | 20704.7 |
| type i-e crispr-associated protein cas7/cse4/casc | EYY04_13000 | Not Available | Positive | 2633590 - 2634645 | 38452.6 |
| type i-e crispr-associated protein cas5/casd | EYY04_13005 | Not Available | Positive | 2634656 - 2635402 | 28672.1 |
| type i-e crispr-associated protein cas6/cse3/case | EYY04_13010 | Not Available | Positive | 2635384 - 2636034 | 24817.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




