Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | EYY04_12605 | Not Available | Negative | 2539327 - 2541087 | 67343.4 |
| hypothetical protein | EYY04_12610 | Not Available | Negative | 2541163 - 2541567 | 14934.9 |
| hypothetical protein | EYY04_12615 | Not Available | Negative | 2541647 - 2542069 | 15950.0 |
| type vi secretion system protein tssa | EYY04_12625 | Not Available | Negative | 2543486 - 2545096 | 60182.3 |
| type vi secretion protein vask | EYY04_12630 | Not Available | Negative | 2545089 - 2548415 | 124088.0 |
| hypothetical protein | EYY04_12635 | Not Available | Negative | 2548472 - 2549686 | 44637.8 |
| hypothetical protein | EYY04_12640 | Not Available | Negative | 2549764 - 2550315 | 20696.2 |
| lytic transglycosylase domain-containing protein | EYY04_12645 | Not Available | Negative | 2550317 - 2550919 | 23280.9 |
| type vi secretion system tip protein vgrg | EYY04_12650 | Not Available | Negative | 2550941 - 2553448 | 92838.8 |
| hypothetical protein | EYY04_12655 | Not Available | Negative | 2553773 - 2554309 | 20910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




