Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | EYY04_12010 | Not Available | Positive | 2417304 - 2418536 | 44178.4 |
| type i toxin-antitoxin system toxin ibsc | EYY04_12015 | Not Available | Positive | 2418765 - 2418824 | 2179.02 |
| type i toxin-antitoxin system ibs family toxin | EYY04_12020 | Not Available | Positive | 2419157 - 2419216 | 2191.02 |
| 5-formyltetrahydrofolate cyclo-ligase | EYY04_12025 | Not Available | Negative | 2419317 - 2419919 | 23242.3 |
| cell division protein zapa | EYY04_12035 | Not Available | Negative | 2420165 - 2420494 | 12594.9 |
| upf0149 family protein ygfb | EYY04_12040 | Not Available | Positive | 2420662 - 2421240 | 21230.8 |
| xaa-pro aminopeptidase | EYY04_12045 | Not Available | Positive | 2421266 - 2422591 | 49806.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EYY04_12050 | Not Available | Positive | 2422588 - 2423766 | 42358.9 |
| fad-dependent 2-octaprenylphenol hydroxylase | EYY04_12055 | Not Available | Positive | 2423789 - 2424991 | 44220.2 |
| hypothetical protein | EYY04_12060 | Not Available | Negative | 2425065 - 2425148 | 3248.95 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




