Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3829 domain-containing protein | EYY04_10100 | Not Available | Negative | 2045613 - 2046653 | 38614.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EYY04_10105 | Not Available | Negative | 2046806 - 2047639 | 30533.8 |
| formate dehydrogenase-n subunit alpha | EYY04_10110 | Not Available | Positive | 2047833 - 2050883 | 112446.0 |
| formate dehydrogenase subunit beta | EYY04_10115 | Not Available | Positive | 2050896 - 2051798 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | EYY04_10120 | Not Available | Positive | 2051795 - 2052430 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | EYY04_10125 | Not Available | Positive | 2052427 - 2053356 | 34690.5 |
| hypothetical protein | EYY04_10130 | Not Available | Negative | 2053686 - 2053928 | 9273.0 |
| copg family transcriptional regulator | EYY04_10135 | Not Available | Negative | 2054148 - 2054366 | 8571.42 |
| helix-turn-helix domain-containing protein | EYY04_10140 | Not Available | Negative | 2054971 - 2055261 | 10863.1 |
| type ii toxin-antitoxin system rele/pare family toxin | EYY04_10145 | Not Available | Negative | 2055262 - 2055573 | 12190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




