Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h(+)/cl(-) exchange transporter clca | EYY04_08255 | Not Available | Positive | 1694137 - 1695558 | 50351.9 |
| hypothetical protein | EYY04_08260 | Not Available | Positive | 1695582 - 1695647 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | EYY04_08265 | Not Available | Positive | 1695640 - 1695984 | 12101.2 |
| tric cation channel family protein | EYY04_08270 | Not Available | Negative | 1696031 - 1696654 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | EYY04_08275 | Not Available | Negative | 1696692 - 1697492 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EYY04_08280 | Not Available | Negative | 1697485 - 1698183 | 24355.4 |
| dgtpase | EYY04_08285 | Not Available | Positive | 1698267 - 1699784 | 59368.2 |
| serine endoprotease degp | EYY04_08290 | Not Available | Positive | 1699914 - 1701338 | 49357.3 |
| cdar family transcriptional regulator | EYY04_08295 | Not Available | Positive | 1701493 - 1702650 | 43660.1 |
| duf3461 family protein | EYY04_08300 | Not Available | Negative | 1702739 - 1703125 | 15097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




