Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | EYY04_04720 | Not Available | Negative | 946723 - 947382 | 24862.1 |
| rna polymerase-associated protein rapa | EYY04_04725 | Not Available | Negative | 947394 - 950300 | 109775.0 |
| dna polymerase ii | EYY04_04730 | Not Available | Negative | 950465 - 952816 | 90044.7 |
| l-ribulose-5-phosphate 4-epimerase | EYY04_04735 | Not Available | Negative | 952891 - 953586 | 25548.4 |
| l-arabinose isomerase | EYY04_04740 | Not Available | Negative | 953755 - 955257 | 56106.2 |
| ribulokinase | EYY04_04745 | Not Available | Negative | 955268 - 956968 | 61115.7 |
| arabinose operon transcriptional regulator arac | EYY04_04750 | Not Available | Positive | 957307 - 958185 | 33385.8 |
| deda family protein | EYY04_04755 | Not Available | Positive | 958271 - 959035 | 28171.7 |
| thiamine abc transporter atp-binding protein thiq | EYY04_04760 | Not Available | Negative | 959149 - 959847 | 25041.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EYY04_04765 | Not Available | Negative | 959831 - 961441 | 59361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




