Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1229477 bp
Thymine Count
1234102 bp
Guanine Count
1272375 bp
Cytosine Count
1252829 bp
Genome Length
4988882 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
341 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EYY04_03900 | Not Available | Negative | 774798 - 775130 | 12281.9 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | EYY04_03905 | Not Available | Negative | 775154 - 776536 | 50714.9 |
| copper response regulator transcription factor cusr | EYY04_03910 | Not Available | Positive | 776693 - 777376 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | EYY04_03915 | Not Available | Positive | 777366 - 778814 | 54135.7 |
| type vi secretion system tip protein vgrg | EYY04_03920 | Not Available | Positive | 779551 - 780594 | 40136.1 |
| Trna-thr | Not Available | Not Available | Positive | 780710 - 780785 | Not Available |
| amino acid abc transporter atp-binding protein | EYY04_03940 | Not Available | Negative | 781003 - 781761 | 28535.9 |
| amino acid abc transporter permease | EYY04_03945 | Not Available | Negative | 781769 - 782872 | 41485.7 |
| amino acid abc transporter permease | EYY04_03950 | Not Available | Negative | 782882 - 784063 | 43236.9 |
| amino acid abc transporter substrate-binding protein | EYY04_03955 | Not Available | Negative | 784131 - 785156 | 37034.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




