Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | EYX99_00555 | Not Available | Negative | 112003 - 112995 | 35722.1 |
| xylose isomerase | EYX99_00560 | Not Available | Positive | 113361 - 114683 | 49721.7 |
| xylulokinase | EYX99_00565 | Not Available | Positive | 114755 - 116209 | 52641.4 |
| hypothetical protein | EYX99_00570 | Not Available | Positive | 116378 - 116719 | 12523.9 |
| yiab family inner membrane protein | EYX99_00575 | Not Available | Positive | 116765 - 117202 | 16115.6 |
| acyltransferase | EYX99_00580 | Not Available | Negative | 117244 - 118239 | 37629.2 |
| hypothetical protein | EYX99_00585 | Not Available | Positive | 118414 - 118713 | 11316.8 |
| glycine--trna ligase subunit alpha | EYX99_00590 | Not Available | Positive | 118808 - 119719 | 34718.2 |
| glycine--trna ligase subunit beta | EYX99_00595 | Not Available | Positive | 119729 - 121798 | 76817.2 |
| type i toxin-antitoxin system toxin hoka | EYX99_00600 | Not Available | Positive | 122121 - 122273 | 5998.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




