Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precolibactin peptidase clbp | EYX99_26065 | Not Available | Negative | 5107895 - 5109409 | 55475.6 |
| colibactin polyketide synthase clbo | EYX99_26070 | Not Available | Negative | 5109422 - 5111881 | 89568.7 |
| colibactin non-ribosomal peptide synthetase clbn | EYX99_26075 | Not Available | Negative | 5111912 - 5116279 | 162070.0 |
| precolibactin export mate transporter clbm | EYX99_26080 | Not Available | Negative | 5116276 - 5117715 | 52865.1 |
| colibactin biosynthesis amidase clbl | EYX99_26085 | Not Available | Negative | 5117777 - 5119240 | 53528.7 |
| hypothetical protein | EYX99_26090 | Not Available | Negative | 5119233 - 5120789 | 56991.1 |
| ents/ybda mfs transporter | EYX99_26095 | Not Available | Positive | 5120790 - 5121911 | 36259.7 |
| phage tail protein | EYX99_26100 | Not Available | Positive | 5121912 - 5122624 | 27108.0 |
| tail assembly protein | EYX99_26105 | Not Available | Positive | 5122561 - 5122973 | 14170.4 |
| host specificity protein j | EYX99_26120 | Not Available | Negative | 5125092 - 5125826 | 26962.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




