Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail assembly protein | EYX99_24885 | Not Available | Positive | 4904312 - 4904944 | 21864.5 |
| host specificity protein j | EYX99_24890 | Not Available | Positive | 4905005 - 4905370 | 12891.1 |
| dna helicase | EYX99_24895 | Not Available | Positive | 4905371 - 4906503 | 42386.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | EYX99_25185 | Not Available | Positive | 4939710 - 4940681 | 37008.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | EYX99_25190 | Not Available | Negative | 4940846 - 4943275 | 88909.9 |
| cytochrome c | EYX99_25195 | Not Available | Negative | 4943300 - 4944400 | 40321.6 |
| copper homeostasis protein cutc | EYX99_25200 | Not Available | Negative | 4944788 - 4945534 | 26742.4 |
| voc family protein | EYX99_25205 | Not Available | Negative | 4945548 - 4946114 | 21223.1 |
| arginine--trna ligase | EYX99_25210 | Not Available | Positive | 4946330 - 4948063 | 64715.8 |
| flagellar protein flhe | EYX99_25215 | Not Available | Negative | 4948116 - 4948508 | 14072.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




