Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | EYX99_22485 | Not Available | Negative | 4447974 - 4448447 | 17433.3 |
| gntr family transcriptional regulator | EYX99_22490 | Not Available | Negative | 4448472 - 4449218 | 28379.2 |
| nickel-responsive transcriptional regulator nikr | EYX99_22495 | Not Available | Negative | 4449417 - 4449818 | 15094.7 |
| nickel import atp-binding protein nike | EYX99_22500 | Not Available | Negative | 4449824 - 4450630 | 29696.4 |
| nickel import atp-binding protein nikd | EYX99_22505 | Not Available | Negative | 4450627 - 4451391 | 26814.1 |
| nickel abc transporter permease subunit nikc | EYX99_22510 | Not Available | Negative | 4451391 - 4452224 | 30391.9 |
| nickel abc transporter permease subunit nikb | EYX99_22515 | Not Available | Negative | 4452221 - 4453165 | 35165.2 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | EYX99_22520 | Not Available | Negative | 4453165 - 4454739 | 58824.2 |
| 4'-phosphopantetheinyl transferase acpt | EYX99_22525 | Not Available | Negative | 4454850 - 4455437 | 21715.8 |
| ai-2e family transporter | EYX99_22530 | Not Available | Negative | 4455492 - 4456541 | 38562.8 |
Pathways
887 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




