Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose operon transcriptional regulator arac | EYX99_21510 | Not Available | Negative | 4254476 - 4255321 | 32183.3 |
| ribulokinase | EYX99_21515 | Not Available | Positive | 4255660 - 4257360 | 61199.7 |
| l-arabinose isomerase | EYX99_21520 | Not Available | Positive | 4257371 - 4258873 | 56118.2 |
| l-ribulose-5-phosphate 4-epimerase | EYX99_21525 | Not Available | Positive | 4259158 - 4259853 | 25416.2 |
| dna polymerase ii | EYX99_21530 | Not Available | Positive | 4259928 - 4262279 | 90112.7 |
| rna polymerase-associated protein rapa | EYX99_21535 | Not Available | Positive | 4262443 - 4265349 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | EYX99_21540 | Not Available | Positive | 4265361 - 4266020 | 24834.0 |
| co-chaperone djla | EYX99_21545 | Not Available | Negative | 4266170 - 4266985 | 30567.2 |
| lps assembly protein lptd | EYX99_21550 | Not Available | Positive | 4267240 - 4269594 | 89629.9 |
| peptidylprolyl isomerase sura | EYX99_21555 | Not Available | Positive | 4269647 - 4270933 | 47286.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




