Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYX99_21255 | Not Available | Negative | 4200672 - 4200911 | 9105.1 |
| bacteriocin immunity protein | EYX99_21260 | Not Available | Negative | 4201079 - 4201363 | 11030.1 |
| type vi secretion system tube protein hcp | EYX99_21265 | Not Available | Negative | 4201366 - 4203147 | 65747.7 |
| aromatic amino acid transporter arop | EYX99_21270 | Not Available | Positive | 4203675 - 4205045 | 49561.9 |
| beta-lactamase regulator ampe | EYX99_21275 | Not Available | Negative | 4205088 - 4205942 | 32170.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EYX99_21280 | Not Available | Negative | 4205939 - 4206490 | 20520.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | EYX99_21285 | Not Available | Positive | 4206578 - 4207471 | 32774.0 |
| prepilin peptidase-dependent pilin | EYX99_21290 | Not Available | Positive | 4207675 - 4208115 | 15621.7 |
| type ii secretion system protein gspe | EYX99_21295 | Not Available | Positive | 4208125 - 4209510 | 50635.4 |
| protein transport protein hofc | EYX99_21300 | Not Available | Positive | 4209500 - 4210702 | 44300.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




