Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | EYX99_20955 | Not Available | Negative | 4130892 - 4131743 | 30424.7 |
| 30s ribosomal protein s2 | EYX99_20960 | Not Available | Negative | 4131878 - 4132603 | 26745.2 |
| type i methionyl aminopeptidase | EYX99_20965 | Not Available | Positive | 4132971 - 4133765 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EYX99_20970 | Not Available | Positive | 4133827 - 4136499 | 102364.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EYX99_20975 | Not Available | Positive | 4136530 - 4137354 | 29892.8 |
| duf3461 family protein | EYX99_20980 | Not Available | Positive | 4137666 - 4138052 | 15097.0 |
| cdar family transcriptional regulator | EYX99_20985 | Not Available | Negative | 4138106 - 4139263 | 43660.1 |
| serine endoprotease degp | EYX99_20990 | Not Available | Negative | 4139418 - 4140842 | 49342.3 |
| dgtpase | EYX99_20995 | Not Available | Negative | 4140972 - 4142489 | 59377.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EYX99_21000 | Not Available | Positive | 4142573 - 4143271 | 24355.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




