Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYX99_20685 | Not Available | Positive | 4080667 - 4080891 | 8347.0 |
| cytochrome b562 | EYX99_20690 | Not Available | Negative | 4080908 - 4081297 | 14548.7 |
| lysr family transcriptional regulator | EYX99_20695 | Not Available | Negative | 4081731 - 4082621 | 33504.7 |
| cytosine permease | EYX99_20700 | Not Available | Negative | 4082699 - 4083922 | 42616.3 |
| glutamyl-trna amidotransferase | EYX99_20705 | Not Available | Negative | 4083945 - 4084334 | 14320.3 |
| carbamate kinase | EYX99_20710 | Not Available | Negative | 4084351 - 4085307 | 34217.1 |
| hypothetical protein | EYX99_20735 | Not Available | Positive | 4091316 - 4091495 | 6992.25 |
| dna-binding protein | EYX99_20740 | Not Available | Negative | 4092245 - 4092775 | 20034.9 |
| hypothetical protein | EYX99_20745 | Not Available | Positive | 4092915 - 4093103 | 7107.51 |
| inovirus gp2 family protein | EYX99_20750 | Not Available | Positive | 4093445 - 4094176 | 27843.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




