Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | EYX99_20630 | Not Available | Positive | 4075445 - 4075528 | 3227.89 |
| type ii toxin-antitoxin system rele/pare family toxin | EYX99_20640 | Not Available | Negative | 4075968 - 4076255 | 11105.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EYX99_20645 | Not Available | Negative | 4076252 - 4076503 | 9211.91 |
| incfii family plasmid replication initiator repa | EYX99_20650 | Not Available | Negative | 4077466 - 4078323 | 32700.6 |
| hypothetical protein | EYX99_20655 | Not Available | Negative | 4078316 - 4078810 | 18191.9 |
| repa leader peptide tap | EYX99_20660 | Not Available | Negative | 4078791 - 4078865 | 2588.29 |
| replication protein repa | EYX99_20665 | Not Available | Positive | 4078944 - 4079075 | 4818.73 |
| replication regulatory protein repa | EYX99_20670 | Not Available | Negative | 4079097 - 4079354 | 9595.37 |
| type i toxin-antitoxin system hok family toxin | EYX99_20675 | Not Available | Negative | 4079638 - 4079787 | 5543.0 |
| hypothetical protein | EYX99_20680 | Not Available | Positive | 4079843 - 4080052 | 7374.69 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




