Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter permease subunit emry | EYX99_20120 | Not Available | Positive | 4006522 - 4008060 | 56004.4 |
| d-serine ammonia-lyase | EYX99_20125 | Not Available | Negative | 4008168 - 4009496 | 47880.3 |
| d-serine transporter dsdx | EYX99_20130 | Not Available | Negative | 4009514 - 4010851 | 47168.1 |
| tonb-dependent siderophore receptor irea | EYX99_20460 | Not Available | Positive | 4047498 - 4049546 | 75324.3 |
| is3 family transposase | EYX99_20470 | Not Available | Positive | 4051004 - 4051404 | 14707.2 |
| hypothetical protein | EYX99_20475 | Not Available | Positive | 4051370 - 4051561 | 7311.77 |
| inovirus gp2 family protein | EYX99_20480 | Not Available | Positive | 4052540 - 4053106 | 22617.9 |
| hypothetical protein | EYX99_20485 | Not Available | Positive | 4053364 - 4053777 | 16002.3 |
| hypothetical protein | EYX99_20490 | Not Available | Negative | 4053808 - 4054101 | 10871.4 |
| hypothetical protein | EYX99_20495 | Not Available | Negative | 4054114 - 4054392 | 10801.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




