Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2545 family protein | EYX99_20070 | Not Available | Positive | 3993407 - 3993649 | 8969.6 |
| colanic acid biosynthesis lipoprotein ypdi | EYX99_20075 | Not Available | Negative | 3993726 - 3994001 | 10043.3 |
| yfdx family protein | EYX99_20080 | Not Available | Positive | 3994297 - 3994932 | 22964.4 |
| formyl-coa--oxalate coa-transferase | EYX99_20085 | Not Available | Positive | 3995444 - 3996694 | 45830.7 |
| oxalyl-coa decarboxylase | EYX99_20090 | Not Available | Positive | 3996748 - 3998442 | 60640.9 |
| transporter yfdv | EYX99_20095 | Not Available | Positive | 3998512 - 3999456 | 33631.9 |
| coa:oxalate coa-transferase | EYX99_20100 | Not Available | Positive | 3999530 - 4000675 | 41704.2 |
| acid-sensing system histidine kinase evgs | EYX99_20105 | Not Available | Negative | 4000731 - 4004324 | 134911.0 |
| acid-sensing system dna-binding response regulator evga | EYX99_20110 | Not Available | Negative | 4004329 - 4004943 | 22691.5 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | EYX99_20115 | Not Available | Positive | 4005359 - 4006522 | 42527.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




