Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | EYX99_19570 | Not Available | Positive | 3893385 - 3894011 | 22534.6 |
| uracil permease | EYX99_19575 | Not Available | Positive | 3894097 - 3895386 | 45095.1 |
| dnaa inactivator hda | EYX99_19580 | Not Available | Positive | 3895436 - 3896182 | 28371.4 |
| arsenate reductase (glutaredoxin) | EYX99_19585 | Not Available | Negative | 3896320 - 3896679 | 13459.5 |
| beta-barrel assembly-enhancing protease | EYX99_19590 | Not Available | Negative | 3896700 - 3898163 | 53907.1 |
| ai-2e family transporter | EYX99_19595 | Not Available | Positive | 3898376 - 3899437 | 39151.8 |
| thioredoxin-dependent thiol peroxidase | EYX99_19600 | Not Available | Negative | 3899536 - 3900006 | 17634.9 |
| glycine cleavage system transcriptional repressor | EYX99_19605 | Not Available | Negative | 3900006 - 3900578 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EYX99_19610 | Not Available | Positive | 3900724 - 3901602 | 31285.9 |
| outer membrane protein assembly factor bamc | EYX99_19615 | Not Available | Positive | 3901619 - 3902653 | 36867.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




