Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | EYX99_18725 | Not Available | Positive | 3711208 - 3711729 | 18940.5 |
| is1 family transposase | EYX99_18730 | Not Available | Positive | 3711730 - 3711825 | 3625.4 |
| hypothetical protein | EYX99_18740 | Not Available | Positive | 3712222 - 3712887 | 24715.8 |
| hypothetical protein | EYX99_18745 | Not Available | Positive | 3712945 - 3713235 | 10963.4 |
| recombinase family protein | EYX99_18755 | Not Available | Positive | 3715624 - 3716184 | 21288.5 |
| tn3-like element tnas1 family transposase | EYX99_18760 | Not Available | Positive | 3716188 - 3719154 | 111673.0 |
| is66 family transposase | EYX99_18770 | Not Available | Negative | 3720148 - 3721605 | 55420.8 |
| is66 family insertion sequence element accessory protein tnpb | EYX99_18775 | Not Available | Negative | 3721636 - 3721986 | 13171.1 |
| is66 family insertion sequence hypothetical protein | EYX99_18780 | Not Available | Negative | 3721983 - 3722408 | 15906.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYX99_18795 | Not Available | Positive | 3724621 - 3728118 | 123641.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




