Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | EYX99_18380 | Not Available | Negative | 3650857 - 3651096 | 8739.74 |
| duf4102 domain-containing protein | EYX99_18390 | Not Available | Positive | 3651847 - 3653049 | 45332.3 |
| alpa family phage regulatory protein | EYX99_18395 | Not Available | Positive | 3653197 - 3653418 | 8410.12 |
| hypothetical protein | EYX99_18400 | Not Available | Positive | 3653423 - 3654250 | 29579.8 |
| replication protein c | EYX99_18405 | Not Available | Positive | 3654237 - 3655118 | 32824.9 |
| stabilization protein | EYX99_18410 | Not Available | Positive | 3656151 - 3656339 | 6881.24 |
| p-type conjugative transfer protein trbj | EYX99_18415 | Not Available | Positive | 3656480 - 3657259 | 28269.3 |
| entry exclusion lipoprotein trbk | EYX99_18420 | Not Available | Positive | 3657272 - 3657508 | 8950.63 |
| p-type conjugative transfer protein trbl | EYX99_18425 | Not Available | Positive | 3657519 - 3658946 | 48409.6 |
| hypothetical protein | EYX99_18430 | Not Available | Positive | 3658951 - 3659199 | 8826.17 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




