Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EYX99_17980 | Not Available | Negative | 3576150 - 3577328 | 42419.1 |
| xaa-pro aminopeptidase | EYX99_17985 | Not Available | Negative | 3577325 - 3578650 | 49801.2 |
| upf0149 family protein ygfb | EYX99_17990 | Not Available | Negative | 3578676 - 3579254 | 21230.8 |
| cell division protein zapa | EYX99_17995 | Not Available | Positive | 3579422 - 3579751 | 12594.9 |
| 5-formyltetrahydrofolate cyclo-ligase | EYX99_18005 | Not Available | Positive | 3579997 - 3580599 | 23301.5 |
| type i toxin-antitoxin system toxin ibsc | EYX99_18010 | Not Available | Negative | 3580701 - 3580760 | 2219.08 |
| d-3-phosphoglycerate dehydrogenase | EYX99_18015 | Not Available | Negative | 3580989 - 3582221 | 44178.4 |
| ribose-5-phosphate isomerase rpia | EYX99_18020 | Not Available | Negative | 3582477 - 3583136 | 22861.8 |
| hypothetical protein | EYX99_18025 | Not Available | Negative | 3583192 - 3583422 | 8372.49 |
| lysr family transcriptional regulator argp | EYX99_18030 | Not Available | Positive | 3583563 - 3584456 | 33473.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




