Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase | EYX99_17730 | Not Available | Negative | 3516546 - 3517238 | 25295.5 |
| sugar porter family mfs transporter | EYX99_17735 | Not Available | Negative | 3517367 - 3518785 | 51697.7 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EYX99_17740 | Not Available | Negative | 3519100 - 3519861 | 27056.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EYX99_17745 | Not Available | Negative | 3519891 - 3520727 | 31078.1 |
| acetyl-coa c-acetyltransferase | EYX99_17750 | Not Available | Negative | 3521014 - 3522195 | 41019.2 |
| haaap family serine/threonine permease | EYX99_17755 | Not Available | Positive | 3522450 - 3523679 | 45101.9 |
| Trna-gly | Not Available | Not Available | Positive | 3523996 - 3524069 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | EYX99_17765 | Not Available | Negative | 3524148 - 3524903 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | EYX99_17770 | Not Available | Positive | 3525317 - 3527614 | 82677.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | EYX99_17775 | Not Available | Positive | 3527625 - 3528503 | 31519.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




