Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | EYX99_17470 | Not Available | Positive | 3449375 - 3450913 | 57981.7 |
| type vi secretion system baseplate subunit tssk | EYX99_17475 | Not Available | Positive | 3450931 - 3452268 | 49718.8 |
| dotu family type iv/vi secretion system protein | EYX99_17480 | Not Available | Positive | 3452265 - 3452930 | 25311.8 |
| ompa family protein | EYX99_17485 | Not Available | Positive | 3452943 - 3454595 | 60423.4 |
| hcp family type vi secretion system effector | EYX99_17490 | Not Available | Positive | 3454653 - 3455144 | 18579.8 |
| type vi secretion system atpase tssh | EYX99_17495 | Not Available | Positive | 3455336 - 3457981 | 98029.4 |
| type vi secretion system tip protein vgrg | EYX99_17500 | Not Available | Positive | 3457993 - 3460473 | 91672.5 |
| hypothetical protein | EYX99_17510 | Not Available | Positive | 3462236 - 3463069 | 32021.6 |
| hypothetical protein | EYX99_17515 | Not Available | Positive | 3463038 - 3463331 | 11526.8 |
| paar domain-containing protein | EYX99_17520 | Not Available | Positive | 3463795 - 3464055 | 8846.61 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




