Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYX99_17015 | Not Available | Negative | 3356471 - 3356689 | 8011.78 |
| hydrogenase maturation nickel metallochaperone hypa | EYX99_17020 | Not Available | Positive | 3356595 - 3356945 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | EYX99_17025 | Not Available | Positive | 3356949 - 3357821 | 31547.8 |
| hydrogenase 3 maturation protein hypc | EYX99_17030 | Not Available | Positive | 3357812 - 3358084 | 9732.58 |
| hydrogenase formation protein hypd | EYX99_17035 | Not Available | Positive | 3358084 - 3359205 | 41367.7 |
| hydrogenase maturation carbamoyl dehydratase hype | EYX99_17040 | Not Available | Positive | 3359202 - 3360212 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | EYX99_17045 | Not Available | Positive | 3360286 - 3362364 | 78456.5 |
| transporter | EYX99_17050 | Not Available | Positive | 3362409 - 3362837 | 14508.6 |
| nitrous oxide-stimulated promoter family protein | EYX99_17055 | Not Available | Negative | 3362876 - 3363220 | 13577.8 |
| dna mismatch repair protein muts | EYX99_17060 | Not Available | Positive | 3363506 - 3366067 | 95352.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




