Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EYX99_16815 | Not Available | Positive | 3319998 - 3320996 | 37614.4 |
| hypothetical protein | EYX99_16820 | Not Available | Positive | 3320993 - 3321904 | 34912.1 |
| integrase | EYX99_16825 | Not Available | Positive | 3321981 - 3323204 | 46674.3 |
| is1 family transposase | EYX99_16830 | Not Available | Negative | 3323261 - 3323428 | 6661.16 |
| Trna-arg | Not Available | Not Available | Positive | 3323449 - 3323525 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3323588 - 3323664 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3323729 - 3323805 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 3323809 - 3323901 | Not Available |
| carbon storage regulator csra | EYX99_16855 | Not Available | Negative | 3324217 - 3324402 | 6856.34 |
| alanine--trna ligase | EYX99_16860 | Not Available | Negative | 3324637 - 3327267 | 95938.7 |
Pathways
885 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




