Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf496 family protein | EYX99_16700 | Not Available | Negative | 3300233 - 3300562 | 12778.5 |
| fusc family protein | EYX99_16705 | Not Available | Negative | 3300734 - 3301792 | 39956.7 |
| dna gyrase inhibitor sbmc | EYX99_16710 | Not Available | Negative | 3301990 - 3302463 | 18032.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | EYX99_16715 | Not Available | Negative | 3302582 - 3303745 | 43051.1 |
| is3 family transposase | EYX99_16720 | Not Available | Positive | 3303774 - 3303945 | 6460.18 |
| dna helicase uvrd | EYX99_16730 | Not Available | Negative | 3304376 - 3305398 | 39557.6 |
| atp-dependent endonuclease | EYX99_16735 | Not Available | Negative | 3305383 - 3306948 | 59483.6 |
| type ii toxin-antitoxin system vapc family toxin | EYX99_16740 | Not Available | Negative | 3307023 - 3307439 | 15265.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | EYX99_16745 | Not Available | Negative | 3307436 - 3307666 | 8748.36 |
| pcar | EYX99_16750 | Not Available | Positive | 3308017 - 3311841 | 145783.0 |
Pathways
839 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




