Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 3220107 - 3220183 | Not Available |
| hypothetical protein | EYX99_16215 | Not Available | Positive | 3220512 - 3221297 | 29469.2 |
| hcp family type vi secretion system effector | EYX99_16220 | Not Available | Negative | 3221637 - 3222116 | 17511.6 |
| hypothetical protein | EYX99_16225 | Not Available | Negative | 3222134 - 3223492 | 51754.5 |
| type vi secretion system membrane subunit tssm | EYX99_16230 | Not Available | Negative | 3223503 - 3226970 | 132264.0 |
| type vi secretion system protein tssa | EYX99_16235 | Not Available | Negative | 3227050 - 3228492 | 53880.1 |
| type vi secretion system atpase tssh | EYX99_16245 | Not Available | Negative | 3229254 - 3232013 | 100201.0 |
| dotu family type iv/vi secretion system protein | EYX99_16250 | Not Available | Negative | 3232023 - 3232787 | 29417.9 |
| type vi secretion system baseplate subunit tssk | EYX99_16255 | Not Available | Negative | 3232792 - 3234138 | 49894.3 |
| type vi secretion system lipoprotein tssj | EYX99_16260 | Not Available | Negative | 3234141 - 3234665 | 19252.9 |
Pathways
842 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




