Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 3211884 - 3211960 | Not Available |
| 2,5-didehydrogluconate reductase dkgb | EYX99_16165 | Not Available | Positive | 3212123 - 3212926 | 29442.3 |
| lysr family transcriptional regulator | EYX99_16170 | Not Available | Negative | 3212923 - 3213837 | 33679.7 |
| endonuclease/exonuclease/phosphatase family protein | EYX99_16175 | Not Available | Positive | 3214078 - 3214878 | 29993.4 |
| methyltransferase domain-containing protein | EYX99_16180 | Not Available | Positive | 3214956 - 3215726 | 28335.5 |
| murein transglycosylase d | EYX99_16185 | Not Available | Negative | 3215773 - 3217131 | 49420.3 |
| hydroxyacylglutathione hydrolase | EYX99_16190 | Not Available | Negative | 3217203 - 3217958 | 28478.0 |
| class i sam-dependent methyltransferase | EYX99_16195 | Not Available | Positive | 3217992 - 3218714 | 27212.7 |
| ribonuclease hi | EYX99_16200 | Not Available | Negative | 3218711 - 3219178 | 17597.9 |
| dna polymerase iii subunit epsilon | EYX99_16205 | Not Available | Positive | 3219243 - 3219974 | 27158.6 |
Pathways
829 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




