Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | EYX99_16040 | Not Available | Negative | 3189377 - 3190111 | 27450.1 |
| outer membrane usher protein papc | EYX99_16045 | Not Available | Negative | 3190182 - 3192692 | 91498.0 |
| type 1 fimbrial protein | EYX99_16050 | Not Available | Negative | 3192751 - 3193311 | 20858.7 |
| type 1 fimbrial protein | EYX99_16055 | Not Available | Negative | 3193401 - 3193970 | 19412.1 |
| major pilus subunit operon regulatory protein papb | EYX99_16060 | Not Available | Negative | 3194156 - 3194470 | 11696.2 |
| hypothetical protein | EYX99_16065 | Not Available | Negative | 3194457 - 3194639 | 6791.36 |
| pilus assembly protein | EYX99_16070 | Not Available | Positive | 3194875 - 3195108 | 8734.52 |
| alpa family transcriptional regulator | EYX99_16075 | Not Available | Negative | 3195451 - 3195687 | 9067.83 |
| hypothetical protein | EYX99_16080 | Not Available | Negative | 3195756 - 3196331 | 21870.9 |
| inovirus gp2 family protein | EYX99_16085 | Not Available | Negative | 3196589 - 3197155 | 22465.8 |
Pathways
430 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




