Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | EYX99_15885 | Not Available | Negative | 3160276 - 3161085 | 29284.6 |
| uridine phosphorylase | EYX99_15890 | Not Available | Positive | 3161347 - 3162111 | 27288.8 |
| c4-dicarboxylate abc transporter permease | EYX99_15895 | Not Available | Negative | 3162146 - 3163636 | 51823.3 |
| tripartite tricarboxylate transporter tctb family protein | EYX99_15900 | Not Available | Negative | 3163649 - 3164155 | 18051.8 |
| tripartite tricarboxylate transporter substrate binding protein | EYX99_15905 | Not Available | Negative | 3164172 - 3165146 | 34224.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EYX99_15910 | Not Available | Negative | 3165171 - 3165800 | 22281.3 |
| 2-dehydro-3-deoxygalactonokinase | EYX99_15915 | Not Available | Negative | 3165790 - 3166794 | 36440.6 |
| iclr family transcriptional regulator | EYX99_15920 | Not Available | Negative | 3166818 - 3167585 | 28298.0 |
| dna recombination protein rmuc | EYX99_15925 | Not Available | Positive | 3167802 - 3169229 | 54753.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EYX99_15930 | Not Available | Positive | 3169324 - 3170079 | 28092.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




