Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | EYX99_15540 | Not Available | Negative | 3107626 - 3108108 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | EYX99_15545 | Not Available | Positive | 3108240 - 3108716 | 17686.6 |
| rnfh family protein | EYX99_15550 | Not Available | Positive | 3108706 - 3108996 | 10816.1 |
| outer membrane protein assembly factor bame | EYX99_15555 | Not Available | Negative | 3109058 - 3109399 | 12302.8 |
| dna repair protein recn | EYX99_15560 | Not Available | Negative | 3109548 - 3111209 | 61398.0 |
| nad(+) kinase | EYX99_15565 | Not Available | Negative | 3111295 - 3112173 | 32583.3 |
| nucleotide exchange factor grpe | EYX99_15570 | Not Available | Positive | 3112296 - 3112889 | 21857.1 |
| duf21 domain-containing protein | EYX99_15575 | Not Available | Negative | 3112944 - 3114230 | 48047.2 |
| inner membrane protein ypjd | EYX99_15580 | Not Available | Negative | 3114251 - 3115042 | 29263.9 |
| signal recognition particle protein | EYX99_15585 | Not Available | Positive | 3115209 - 3116570 | 49790.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




