Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter substrate-binding protein rbsb | EYX99_12640 | Not Available | Positive | 2531680 - 2532570 | 30940.2 |
| ribokinase | EYX99_12645 | Not Available | Positive | 2532696 - 2533625 | 32278.4 |
| ribose operon transcriptional repressor rbsr | EYX99_12650 | Not Available | Positive | 2533629 - 2534621 | 36584.1 |
| dha2 family efflux mfs transporter permease subunit | EYX99_12655 | Not Available | Negative | 2534587 - 2536014 | 51426.8 |
| fadr family transcriptional regulator | EYX99_12660 | Not Available | Negative | 2536037 - 2536729 | 26104.6 |
| single-stranded dna-binding protein | EYX99_12675 | Not Available | Positive | 2538102 - 2538599 | 18229.4 |
| duf905 domain-containing protein | EYX99_12680 | Not Available | Positive | 2538662 - 2538895 | 9121.72 |
| parb/repb/spo0j family partition protein | EYX99_12685 | Not Available | Positive | 2538954 - 2540912 | 71442.8 |
| conjugation system sos inhibitor psib | EYX99_12690 | Not Available | Positive | 2540967 - 2541401 | 15847.7 |
| plasmid sos inhibition protein a | EYX99_12695 | Not Available | Positive | 2541398 - 2542117 | 27689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




