Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent78 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1327314 bp
Thymine Count
1315589 bp
Guanine Count
1338620 bp
Cytosine Count
1355735 bp
Genome Length
5337595 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colibactin biosynthesis luxr family transcriptional regulator clbr | EYX99_12370 | Not Available | Positive | 2477948 - 2478160 | 8259.03 |
| colibactin biosynthesis phosphopantetheinyl transferase clba | EYX99_12375 | Not Available | Positive | 2478161 - 2478895 | 28673.5 |
| hypothetical protein | EYX99_12390 | Not Available | Negative | 2480198 - 2480596 | 15072.0 |
| l,d-transpeptidase | EYX99_12395 | Not Available | Negative | 2480915 - 2481850 | 34447.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EYX99_12400 | Not Available | Negative | 2481912 - 2482991 | 36862.2 |
| adenosylcobinamide-gdp ribazoletransferase | EYX99_12405 | Not Available | Negative | 2483003 - 2483746 | 26431.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EYX99_12410 | Not Available | Negative | 2483743 - 2484288 | 20195.2 |
| hypothetical protein | EYX99_12425 | Not Available | Positive | 2485656 - 2485853 | 7658.48 |
| tonb-dependent receptor | EYX99_12430 | Not Available | Positive | 2485960 - 2488107 | 79181.7 |
| transcriptional regulator | EYX99_12435 | Not Available | Negative | 2488478 - 2489122 | 24652.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




