Escherichia coli strain Broiler parent78

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent78 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37°C within a mesophilic temperature range. This strain can be found in pairs or singles and possesses flagella, indicating its mobility. It exists in a biotic relationship as a free-living organism and is associated with a variety of hosts, including Homo sapiens, Gallus gallus, and several other vertebrates, invertebrates, and plants. This strain is notably pathogenic to humans, with a wide array of health effects. It is linked to urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis, septicemia, and hemolytic uremic syndrome (HUS). The diversity of infections associated with E. coli strain Broiler parent78 highlights its potential as a significant pathogen in both clinical and agricultural settings. The bacterium's ecological role can be seen in its interactions with various hosts, suggesting that it may contribute to both health and disease in these organisms. Its ability to inhabit multiple environments and hosts indicates a versatile ecological niche, which may facilitate its transmission and impact on public health. Understanding the pathogenic mechanisms and host interactions of E. coli strain Broiler parent78 can provide insights into controlling its spread and mitigating the associated health risks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent78

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent78
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent78

Gene Summary

Adenine Count

1327314 bp

Thymine Count

1315589 bp

Guanine Count

1338620 bp

Cytosine Count

1355735 bp

Genome Length

5337595 bp

Protein-coding Genes

4757 genes

Non-Coding Genes

448 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf945 family proteinEYX99_10980Not AvailablePositive2176643 - 217807352644.0
acyltransferaseEYX99_10985Not AvailableNegative2178114 - 217904636276.1
hypothetical proteinEYX99_10990Not AvailableNegative2179166 - 21793517116.75
dna polymerase iEYX99_10995Not AvailablePositive2179410 - 2182196103278.0
yiha family ribosome biogenesis gtp-binding proteinEYX99_11000Not AvailableNegative2182578 - 218321023562.2
der gtpase-activating protein yihiEYX99_11005Not AvailablePositive2183792 - 218430119058.3
oxygen-independent coproporphyrinogen iii oxidaseEYX99_11010Not AvailablePositive2184490 - 218586352707.9
yshb family small membrane proteinEYX99_11015Not AvailableNegative2186001 - 21861113618.45
nitrogen regulation protein nr(i)EYX99_11020Not AvailableNegative2186223 - 218763252305.9
two-component system sensor histidine kinase ntrbEYX99_11025Not AvailableNegative2187644 - 218869338571.6

Displaying genes 2411 – 2420 of 5205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total