Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent76 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242237 bp
Thymine Count
1236200 bp
Guanine Count
1266410 bp
Cytosine Count
1270581 bp
Genome Length
5015437 bp
Protein-coding Genes
4622 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | EYX97_15070 | Not Available | Positive | 2961506 - 2962006 | 18710.3 |
| type vi secretion system contractile sheath large subunit | EYX97_15075 | Not Available | Positive | 2962065 - 2963603 | 57965.6 |
| type vi secretion system baseplate subunit tssk | EYX97_15080 | Not Available | Positive | 2963621 - 2964958 | 49689.8 |
| dotu family type iv/vi secretion system protein | EYX97_15085 | Not Available | Positive | 2964955 - 2965620 | 25295.7 |
| ompa family protein | EYX97_15090 | Not Available | Positive | 2965633 - 2967285 | 60548.4 |
| hcp family type vi secretion system effector | EYX97_15095 | Not Available | Positive | 2967343 - 2967834 | 18649.9 |
| type vi secretion system atpase tssh | EYX97_15100 | Not Available | Positive | 2968025 - 2970661 | 97526.9 |
| type vi secretion system tip protein vgrg | EYX97_15105 | Not Available | Positive | 2970673 - 2973180 | 92663.5 |
| lytic transglycosylase domain-containing protein | EYX97_15110 | Not Available | Positive | 2973202 - 2973804 | 23310.9 |
| hypothetical protein | EYX97_15115 | Not Available | Positive | 2973806 - 2974357 | 20696.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




