Escherichia coli strain Broiler parent72

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent72 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe. This strain exhibits a cell arrangement characterized by pairs and singles, and it possesses flagella, indicating mobility. Optimal growth occurs at 37°C, placing it within the mesophilic temperature range. The organism is free-living but is also associated with a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals and vertebrates, as well as some plants like Solanum lycopersicum and Brassica oleracea var. italica. The strain is known for its potential health effects, which include urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). It can contribute to a variety of illnesses, including neonatal meningitis, diarrheal disease, and colibacillosis, which underscores its pathogenicity in humans. Given its extensive host range and the significant health impacts associated with infections caused by E. coli strain Broiler parent72, this bacterium plays a critical role in both human health and the ecology of animal populations. Its ability to thrive in diverse environments and cause a wide array of diseases highlights the importance of monitoring and understanding such pathogenic strains in public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent72

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent72
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent72

Gene Summary

Adenine Count

1241897 bp

Thymine Count

1246263 bp

Guanine Count

1277510 bp

Cytosine Count

1270652 bp

Genome Length

5036441 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cida/lrga family proteinEYX93_17125Not AvailableNegative3424267 - 342467715472.9
lysr family transcriptional regulatorEYX93_17130Not AvailablePositive3424781 - 342566533106.7
na+/h+ antiporterEYX93_17135Not AvailableNegative3425701 - 342735060526.6
ncs2 family permeaseEYX93_17140Not AvailableNegative3427501 - 342885045762.5
redox-sensitive transcriptional activator soxrEYX93_17145Not AvailableNegative3429397 - 342986117249.9
superoxide response transcriptional regulator soxsEYX93_17150Not AvailablePositive3429947 - 343027012911.6
c-di-gmp phosphodiesterase pdecEYX93_17155Not AvailableNegative3430273 - 343185960756.6
hypothetical proteinEYX93_17160Not AvailablePositive3432288 - 343256910288.0
single-stranded dna-binding protein ssb1EYX93_17165Not AvailableNegative3432668 - 343320418976.1
excinuclease abc subunit uvraEYX93_17170Not AvailablePositive3433459 - 3436281103876.0

Displaying genes 3291 – 3300 of 4830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total