Escherichia coli strain Broiler parent72

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent72 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe. This strain exhibits a cell arrangement characterized by pairs and singles, and it possesses flagella, indicating mobility. Optimal growth occurs at 37°C, placing it within the mesophilic temperature range. The organism is free-living but is also associated with a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals and vertebrates, as well as some plants like Solanum lycopersicum and Brassica oleracea var. italica. The strain is known for its potential health effects, which include urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). It can contribute to a variety of illnesses, including neonatal meningitis, diarrheal disease, and colibacillosis, which underscores its pathogenicity in humans. Given its extensive host range and the significant health impacts associated with infections caused by E. coli strain Broiler parent72, this bacterium plays a critical role in both human health and the ecology of animal populations. Its ability to thrive in diverse environments and cause a wide array of diseases highlights the importance of monitoring and understanding such pathogenic strains in public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent72

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent72
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent72

Gene Summary

Adenine Count

1241897 bp

Thymine Count

1246263 bp

Guanine Count

1277510 bp

Cytosine Count

1270652 bp

Genome Length

5036441 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme lyase ccmf/nrfe family subunitEYX93_17075Not AvailableNegative3413620 - 341533863665.3
cytochrome c nitrite reductase subunit nrfdEYX93_17080Not AvailableNegative3415358 - 341631435053.4
cytochrome c nitrite reductase fe-s proteinEYX93_17085Not AvailableNegative3416311 - 341698224590.8
cytochrome c nitrite reductase pentaheme subunitEYX93_17090Not AvailableNegative3416979 - 341754520657.6
ammonia-forming nitrite reductase cytochrome c552 subunitEYX93_17095Not AvailableNegative3417590 - 341902653704.7
hypothetical proteinEYX93_17100Not AvailableNegative3418947 - 34191447730.29
acetate--coa ligaseEYX93_17105Not AvailablePositive3419418 - 342137672015.3
duf485 domain-containing proteinEYX93_17110Not AvailablePositive3421586 - 342190011658.3
cation/acetate symporter actpEYX93_17115Not AvailablePositive3421897 - 342354659195.7
lrgb family proteinEYX93_17120Not AvailableNegative3423585 - 342427424932.5

Displaying genes 3281 – 3290 of 4830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total